Difference between revisions of "File Format"

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It was dark when I woke. This is a ray of snusihne.
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== Rules of Making Files for NeuroTycho ==
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Version 0.1, 2011-01-17, by Y.N and Z.C
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'''<Basic rules>'''
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If the data is represented in time, the time is represented by row.
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The data type of numerals is “double”.
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'''<Cerebus>'''
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[[ECoG data (signal):]]
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Each file “ECoG_chN.mat” contains one row-vector named “ECoGData_chN”, N is the index of the channel (N=1, 2, …). The corresponding time-stamp is indicated in ECoG_time.mat (see below).
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The location of electrode is documented in another file.
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[[ECoG data (time-stamp):]]
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The file “ECoG_time.mat” contains one row-vector named “ECoGTime” with the same length as ECoGData_chN. The time does not necessarily start from zero.
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[[EMG data:]]
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The file “EMG.mat” contains a matrix named “EMGData” and one row-vector named “EMGTime”. EMGData contains EMG data as a time × channel matrix, and EMGTime contains the corresponding time-stamps. The time does not necessarily start from zero.
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If EMG.mat would be released with ECoG_time.mat, they will share the same time-stamps.
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The location of electrode is documented in another file.
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[[Event data:]]
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The file “Event.mat” contains two row-vectors named “EventData” and  “EventTime”. EventData contains analog data and EventTime contains corresponding time-stamps. The time does not necessarily start from zero.
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The correspondence between values in EventData and the particular events (e.g. ITI start, Stimulus on/ off…) is documented in another file.
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'''<Vicon>'''
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[[Motion Data:]]
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The file “Motion.mat” contains a matrix named “MotionData” and one row-vector named “MotionTime”. MotionData is a time × marker matrix containing 3-D position of markers, and MotionTime contains the corresponding time-stamps. The time does not necessarily start from zero.
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The locations of the markers are documented in another file.
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[[Eye-track Data:]]
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The file “EyeTrack.mat” contains one matrix named “EyeTrackData” and one row-vector named “EyeTrackTime”. EyeTrackData is a time × variable matrix containing various variables describing eye motion (such as eye position, pupil size, etc.,). EyeTrackTime contains the corresponding time-stamps. The time does not necessarily start from zero.
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The information of each variable is documented in another file.

Latest revision as of 14:14, 20 November 2011

Rules of Making Files for NeuroTycho

Version 0.1, 2011-01-17, by Y.N and Z.C


<Basic rules>

If the data is represented in time, the time is represented by row. The data type of numerals is “double”.


<Cerebus>

ECoG data (signal):

Each file “ECoG_chN.mat” contains one row-vector named “ECoGData_chN”, N is the index of the channel (N=1, 2, …). The corresponding time-stamp is indicated in ECoG_time.mat (see below). The location of electrode is documented in another file.

ECoG data (time-stamp):

The file “ECoG_time.mat” contains one row-vector named “ECoGTime” with the same length as ECoGData_chN. The time does not necessarily start from zero.

EMG data:

The file “EMG.mat” contains a matrix named “EMGData” and one row-vector named “EMGTime”. EMGData contains EMG data as a time × channel matrix, and EMGTime contains the corresponding time-stamps. The time does not necessarily start from zero. If EMG.mat would be released with ECoG_time.mat, they will share the same time-stamps. The location of electrode is documented in another file.

Event data:

The file “Event.mat” contains two row-vectors named “EventData” and “EventTime”. EventData contains analog data and EventTime contains corresponding time-stamps. The time does not necessarily start from zero. The correspondence between values in EventData and the particular events (e.g. ITI start, Stimulus on/ off…) is documented in another file.


<Vicon>

Motion Data:

The file “Motion.mat” contains a matrix named “MotionData” and one row-vector named “MotionTime”. MotionData is a time × marker matrix containing 3-D position of markers, and MotionTime contains the corresponding time-stamps. The time does not necessarily start from zero. The locations of the markers are documented in another file.

Eye-track Data:

The file “EyeTrack.mat” contains one matrix named “EyeTrackData” and one row-vector named “EyeTrackTime”. EyeTrackData is a time × variable matrix containing various variables describing eye motion (such as eye position, pupil size, etc.,). EyeTrackTime contains the corresponding time-stamps. The time does not necessarily start from zero. The information of each variable is documented in another file.