Difference between revisions of "Marmoset Optogenetics Details"
(Created page with "== Data format == There are two zip files, each contain data collected from a day of each monkey, including three types of MATLAB files: 1. ECoG_ch*.mat: ECoG signals for e...") |
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| − | 1. | + | 1. ECoG_chXX.mat: ECoG signals for each electrode with the sampling rate of 1000Hz. |
2. Event.mat: | 2. Event.mat: | ||
| − | EventTbl includes the information of each photo stimulation. | + | EventTbl(struct) includes the information of each photo stimulation. |
StimTbl_Label: {'Ch' 'Output' 'Trial' 'ITI' 'Start' 'End'} | StimTbl_Label: {'Ch' 'Output' 'Trial' 'ITI' 'Start' 'End'} | ||
| Line 15: | Line 15: | ||
StimTbl: {400x6 double} | StimTbl: {400x6 double} | ||
| − | + | -Ch and Output indicate a number of LED and intensity of stimuli, respectively. | |
| Line 38: | Line 38: | ||
== Reference == | == Reference == | ||
| − | Komatsu M, Sugano E, Tomita H and Fujii N (2017) A Chronically Implantable Bidirectional Neural Interface for Non-human Primates. Front. Neurosci. 11:514. doi: | + | Komatsu M, Sugano E, Tomita H and Fujii N (2017) A Chronically Implantable Bidirectional Neural Interface for Non-human Primates. Front. Neurosci. 11:514. doi:10.3389/fnins.2017.00514 |
Latest revision as of 12:31, 30 September 2017
Data format
There are two zip files, each contain data collected from a day of each monkey, including three types of MATLAB files:
1. ECoG_chXX.mat: ECoG signals for each electrode with the sampling rate of 1000Hz.
2. Event.mat:
EventTbl(struct) includes the information of each photo stimulation.
StimTbl_Label: {'Ch' 'Output' 'Trial' 'ITI' 'Start' 'End'}
StimTbl: {400x6 double}
-Ch and Output indicate a number of LED and intensity of stimuli, respectively.
3. ElectrodesXX.mat: Information of the ECoG electrode locations
LINE: The outline of the marmoset brain
MRI: The MRI image of the marmoset brain
X: X positions of the electrodes
Y: Y positions of the electrodes
XL: X positions of the LEDs
YL: Y positions of the LEDs
XI: X positions of the injection sites
YI: Y positions of the injection sites
Reference
Komatsu M, Sugano E, Tomita H and Fujii N (2017) A Chronically Implantable Bidirectional Neural Interface for Non-human Primates. Front. Neurosci. 11:514. doi:10.3389/fnins.2017.00514
