Difference between revisions of "Marmoset Optogenetics Details"

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(Created page with "== Data format == There are two zip files, each contain data collected from a day of each monkey, including three types of MATLAB files: 1. ECoG_ch*.mat: ECoG signals for e...")
 
 
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1. ECoG_ch*.mat: ECoG signals for each electrode with the sampling rate of 1000Hz.
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1. ECoG_chXX.mat: ECoG signals for each electrode with the sampling rate of 1000Hz.
  
  
 
2. Event.mat:
 
2. Event.mat:
  
EventTbl includes the information of each photo stimulation.
+
EventTbl(struct) includes the information of each photo stimulation.
  
 
StimTbl_Label: {'Ch' 'Output' 'Trial' 'ITI' 'Start' 'End'}
 
StimTbl_Label: {'Ch' 'Output' 'Trial' 'ITI' 'Start' 'End'}
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StimTbl: {400x6 double}
 
StimTbl: {400x6 double}
  
*Ch and Output indicate a number of LED and intensity of stimuli, respectively.  
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-Ch and Output indicate a number of LED and intensity of stimuli, respectively.  
  
  
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== Reference ==  
 
== Reference ==  
  
Komatsu M, Sugano E, Tomita H and Fujii N (2017) A Chronically Implantable Bidirectional Neural Interface for Non-human Primates. Front. Neurosci. 11:514. doi: <a href="https://www.frontiersin.org/articles/10.3389/fnins.2017.00514/full">10.3389/fnins.2017.00514</a>
+
Komatsu M, Sugano E, Tomita H and Fujii N (2017) A Chronically Implantable Bidirectional Neural Interface for Non-human Primates. Front. Neurosci. 11:514. doi:10.3389/fnins.2017.00514

Latest revision as of 12:31, 30 September 2017

Data format

There are two zip files, each contain data collected from a day of each monkey, including three types of MATLAB files:


1. ECoG_chXX.mat: ECoG signals for each electrode with the sampling rate of 1000Hz.


2. Event.mat:

EventTbl(struct) includes the information of each photo stimulation.

StimTbl_Label: {'Ch' 'Output' 'Trial' 'ITI' 'Start' 'End'}

StimTbl: {400x6 double}

-Ch and Output indicate a number of LED and intensity of stimuli, respectively.


3. ElectrodesXX.mat: Information of the ECoG electrode locations

LINE: The outline of the marmoset brain

MRI: The MRI image of the marmoset brain

X: X positions of the electrodes

Y: Y positions of the electrodes

XL: X positions of the LEDs

YL: Y positions of the LEDs

XI: X positions of the injection sites

YI: Y positions of the injection sites

Reference

Komatsu M, Sugano E, Tomita H and Fujii N (2017) A Chronically Implantable Bidirectional Neural Interface for Non-human Primates. Front. Neurosci. 11:514. doi:10.3389/fnins.2017.00514